Information for 7-TCAGAAACAAAAT (Motif 6)

A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T A C G T T C A G A C G T A C G T A G C T G T A C A C G T A C T G C G T A
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.2 +/- 21.2bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCAGAAACAAAAT-
--AGAAACGAAAGT
 A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCAGAAACAAAAT--
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCAGAAACAAAAT--
AAAGTAAACAAAAATT
 A C G T A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAGAAACAAAAT---
-AACAAACAACAAGAG
 A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCAGAAACAAAAT-
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAGAAACAAAAT--
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCAGAAACAAAAT
TACTGGAAAAAAAA
 A C G T A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCAGAAACAAAAT---
TAGGTAATAAAATTCA
 A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGAAACAAAAT
--GTAAACAA---
 A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCAGAAACAAAAT
-----AACAAT--
 A C G T A G T C C G T A A C T G C T G A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T