Information for 6-TTTGCMTSTTGTA (Motif 5)

A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A G T C A T A C G G T C A A C G T A C T G A G T C C G T A C G T A C G T A
p-value:1e-11
log p-value:-2.668e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 15.3bp
Average Position of motif in Background38.6 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCMTSTTGTA
ATTTGCATAT----
 A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTTGCMTSTTGTA
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTGCMTSTTGTA
ATTTGCATAA----
 A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCMTSTTGTA
AATTTGCATANT---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCMTSTTGTA
BTVATTWGCATA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCMTSTTGTA
CTAATTTGCATATT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCMTSTTGTA
ATTTGCATA-----
 A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCMTSTTGTA
TNTAATTTGCATANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCMTSTTGTA
CTCATTTGCATW-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCMTSTTGTA
TNTAATTTGCATACNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T A T G C A C G T A C G T A C T G C G A T C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T