Information for 10-RCCCCCTAGCTGT (Motif 10)

C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T
Reverse Opposite:
T G C A A G T C C G T A A C T G G T A C G A C T C T G A A C T G C T A G A C T G A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.838
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 8.7bp
Average Position of motif in Background73.9 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:RCCCCCTAGCTGT-
--CCCCCTGCTGTG
 C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:RCCCCCTAGCTGT-
GACCCCCCGCTGTG
 C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:RCCCCCTAGCTGT--
GGCCYCCTGCTGDGH
 C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RCCCCCTAGCTGT
CGCCCCCTGACA--
 A C G T C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:RCCCCCTAGCTGT--
GACCCCCCGCTGCGC
 C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RCCCCCTAGCTGT--
GACCCCCCGCTGTGC
 C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------RCCCCCTAGCTGT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------RCCCCCTAGCTGT
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----RCCCCCTAGCTGT
AGGAGACCCCCAATTTG-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:RCCCCCTAGCTGT--
-----CCAGCTGTTN
 C T A G A G T C A G T C A G T C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A