Information for 3-CTTCCGGGAGGGTTKM (Motif 6)

A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
Reverse Opposite:
C A G T T G A C C G T A C G T A G T A C A T G C A G T C A C G T A G T C G T A C G T A C T A C G C T A G C G T A C T G A A C T G
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 21.9bp
Average Position of motif in Background12.7 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3/MA0737.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTCCGGGAGGGTTKM
CTTCGTGGGGGGTC--
 A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCGGGAGGGTTKM
GCTTCGTGGGGGGTCT-
 A C G T A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTTCCGGGAGGGTTKM
CTTCCNGGAA------
 A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTCCGGGAGGGTTKM
CTTCGCGGGGGGTC--
 A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTCCGGGAGGGTTKM
NTTTCCNGGAAA-----
 A C G T A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTTCCGGGAGGGTTKM
CCCCCCCGGGGGGGT---
 A C G T A C G T A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTTCCGGGAGGGTTKM
NNCTTCCNGGAAGN----
 A C G T A C G T A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTCCGGGAGGGTTKM
TTTCCTGGAAAGNNN-
 A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTTCCGGGAGGGTTKM
CCCCCCCGGGGGGGT---
 A C G T A C G T A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTCCGGGAGGGTTKM-
GTATTGGGTGGGTAATT
 A G T C A G C T A C G T A G T C A G T C A C T G A C T G A C T G C G T A A C T G A T C G A C T G C G A T A C G T A C T G G T C A A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T