Information for 2-CGGTCATTTT (Motif 5)

T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T
Reverse Opposite:
C G T A G C T A C T G A T C G A C G A T T A C G T C G A T A G C T A G C A C T G
p-value:1e-11
log p-value:-2.706e+01
Information Content per bp:1.683
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif395.3
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets50.2 +/- 21.9bp
Average Position of motif in Background45.8 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCATTTT-
GCNGCCATCTTG
 A C G T T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGGTCATTTT
--GTCATN--
 T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCATTTT-
GCCGCCATCTTG
 A C G T T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CGGTCATTTT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGGTCATTTT
AGGTCA----
 T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGTCATTTT
AGRGGTCA----
 A C G T A C G T T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGTCATTTT
CNGTGATTTN
 T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGTCATTTT
GTCCGCCATTA-
 A C G T A C G T T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGTCATTTT
AGCTCATTAT
 T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGGTCATTTT
TGCTGTGATTT-
 A C G T A C G T T G A C A T C G A T C G A G C T A T G C G C T A A G C T G A C T C G A T G C A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T