Information for 12-TTCGCCCGGGCGA (Motif 21)

A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A
Reverse Opposite:
A C G T A T G C C T A G A T G C A G T C A G T C A C T G A C T G A C T G G T A C A T C G T G C A G T C A
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.798
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 21.4bp
Average Position of motif in Background52.6 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTCGCCCGGGCGA--
-TTGCCATGGCAACN
 A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A A C G T A C G T
A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCGCCCGGGCGA
-NGTCCCNNGGGA
 A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A
A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCGCCCGGGCGA-----
---TCCCAGMCRAGCCCC
 A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTCGCCCGGGCGA-
GTTGCCATGGNAAC
 A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCGCCCGGGCGA-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCGCCCGGGCGA--
GTTGCCATGGCAACM
 A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A A C G T A C G T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTCGCCCGGGCGA-
CGGTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTCGCCCGGGCGA-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTCGCCCGGGCGA
--TGCCCAGNHW-
 A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCGCCCGGGCGA--
-ATGCCCGGGCATGT
 A C G T A C G T A T G C A C T G A G T C A G T C G T A C A C T G A C T G A T C G A G T C A T C G G T C A A C G T A C G T
A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T