Information for 11-KAAGMAGMTKCKC (Motif 19)

A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
Reverse Opposite:
A C T G G T C A A C T G G T A C C G T A A C T G A G T C A C G T A C T G A G T C A C G T A G C T G T A C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.7 +/- 13.5bp
Average Position of motif in Background51.2 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:KAAGMAGMTKCKC
--CGCAGCTGCG-
 A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:KAAGMAGMTKCKC
--AGCAGCTGCT-
 A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-KAAGMAGMTKCKC---
CTCAGCAGCTGCTACTG
 A C G T A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KAAGMAGMTKCKC
NNAGCAGCTGCT-
 A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--KAAGMAGMTKCKC
AGGAAACAGCTG---
 A C G T A C G T A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KAAGMAGMTKCKC
-CAGCAGCTGN--
 A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KAAGMAGMTKCKC
--GACAGCTGCAG
 A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KAAGMAGMTKCKC
NGNGACAGCTGCN-
 A C G T A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:KAAGMAGMTKCKC
-NNACAGCTGC--
 A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KAAGMAGMTKCKC
--AACAGCTGCAG
 A C T G C T G A C G T A A C T G G T A C C G T A A C T G G T A C C G A T A C T G G T A C A C G T A G T C
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G