Information for 5-GCTGTGCAGG (Motif 18)

A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G
Reverse Opposite:
A T G C G T A C A C G T A C T G A G T C C T G A A G T C C T G A T C A G A G T C
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.825
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif302.9
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets55.5 +/- 23.0bp
Average Position of motif in Background50.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTGTGCAGG
GCTGTG----
 A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGCAGG
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGCAGG
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGCAGG-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTGTGCAGG-
-CTGTTCCTGG
 A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGCAGG
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTGTGCAGG
WDNCTGGGCA--
 A C G T A C G T A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGCAGG--
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCTGTGCAGG
CCTGCTGAGH---
 A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------GCTGTGCAGG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G C T C T A G T G A C T G C A A C T G T A C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T