Information for 5-TTYRYCTATTYWTAYT (Motif 13)

A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T C G T A C G A T C T G A C G T A G T C A A C G T C G T A A C T G C T A G A G T C C T G A C G T A C G T A
p-value:1e-7
log p-value:-1.661e+01
Information Content per bp:1.852
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 33.7bp
Average Position of motif in Background55.6 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TTYRYCTATTYWTAYT
----TCTATTTATAGN
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TTYRYCTATTYWTAYT
----GCTATTTATAGC
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TTYRYCTATTYWTAYT
----TCTATTTTTAGA
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A C G T A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TTYRYCTATTYWTAYT
----KCTATTTTTRGH
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TTYRYCTATTYWTAYT
-----CTATTTTTGG-
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTYRYCTATTYWTAYT--
---TTCTATTTTTAGNNN
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTYRYCTATTYWTAYT
----GCTATTTTTAGC
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTYRYCTATTYWTAYT
----GCTATTTTTGGM
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTYRYCTATTYWTAYT
TTGACCTANTTATN--
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTYRYCTATTYWTAYT
---GHATATKCAT---
 A C G T A C G T A G C T C T A G A G T C A G T C A C G T C G T A A C G T A C G T A G C T C G T A A C G T C G T A A G C T A C G T
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T