Information for 4-GAGTGTTTCA (Motif 10)

C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A G T C A A T G C C G T A A G T C A G C T A G T C
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif112.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets43.4 +/- 26.8bp
Average Position of motif in Background52.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGTGTTTCA
TTRAGTGSYK--
 A C G T A C G T C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAGTGTTTCA--
--TGGTTTCAGT
 C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTTTCA
TTAAGTGCTT--
 A C G T A C G T C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAGTGTTTCA
---TGAGTCA
 C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

FOSL2/MA0478.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGTGTTTCA-
GGATGACTCAT
 C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A A C G T
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGTGTTTCA-
GGATGACTCAT
 C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGTGTTTCA--
-AATGTATCAAT
 C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGTGTTTCA--
-GGTGACTCATG
 C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGTGTTTCA-
-NATGTTGCAA
 C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGTGTTTCA-
AGGAGATGACTCAT
 A C G T A C G T A C G T C T A G C T G A C T A G A C G T T A C G A C G T A C G T A C G T A G T C C G T A A C G T
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T