Information for 1-TTWATATGGAAKTTCC (Motif 1)

C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A C G T A G T C A A C G T A C G T A G T C G A T C C G T A A C G T C G T A C A G T C G A T C G T A C G T A
p-value:1e-15
log p-value:-3.501e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.20%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.4 +/- 21.8bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TTWATATGGAAKTTCC
------GGGAATTTCC
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TTWATATGGAAKTTCC
------GGGAATTTCC
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TTWATATGGAAKTTCC-
-------GGAAANCCCC
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTWATATGGAAKTTCC
-TTCTNMGGAA-----
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TTWATATGGAAKTTCC--
------GGGAAATCCCCN
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PB0115.1_Ehf_2/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TTWATATGGAAKTTCC------
------TAGTATTTCCGATCTT
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTWATATGGAAKTTCC
--NTTATTGATTTTTT
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C
A C G T A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTWATATGGAAKTTCC
ANTTCTCAGGAANNN--
 A C G T C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTWATATGGAAKTTCC
--ANTATCGATTTTTN
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C
A C G T A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTWATATGGAAKTTCC
--ATTATCGATTTTTT
 C G A T A C G T C G T A G T C A A C G T G T C A A C G T C T A G A C T G C G T A C G T A A C G T C G A T A C G T A G T C G T A C
A C G T A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T