p-value: | 1e-3 |
log p-value: | -7.458e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 6.25% |
Number of Background Sequences with motif | 2.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 55.0 +/- 0.0bp |
Average Position of motif in Background | 49.4 +/- 31.7bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0123.1_Foxl1_2/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATTTTCAAACAAA--- ATATCAAAACAAAACA |
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Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTTTCAAACAAA-- ATTTGCATACAATGG |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATTTTCAAACAAA CGGTTTCAAA---- |
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Sox3/MA0514.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | ATTTTCAAACAAA-- -----AAAACAAAGG |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTTCAAACAAA TNTAATTTGCATACNA- |
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PH0145.1_Pou2f3/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTTCAAACAAA TNTAATTTGCATACNA- |
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OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATTTTCAAACAAA-- ATTTGCATAACAATG |
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PH0144.1_Pou2f2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTTCAAACAAA TNTAATTTGCATANNN- |
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MF0011.1_HMG_class/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | ATTTTCAAACAAA -------AACAAT |
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SRY/MA0084.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ATTTTCAAACAAA ----GTAAACAAT |
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