Information for 5-TAGCCCACAVAABTAT (Motif 5)

A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
Reverse Opposite:
C T G A C G A T G T C A T A G C C G A T A C G T A C T G A C G T A C T G A C G T A C T G A C T G A T C G A T G C A C G T C T G A
p-value:1e-7
log p-value:-1.761e+01
Information Content per bp:1.727
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.5 +/- 18.6bp
Average Position of motif in Background60.3 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAGCCCACAVAABTAT
-AAACCACAGAN----
 A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAGCCCACAVAABTAT
CGAAGCACACAAAATA--
 A C G T A C G T A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAGCCCACAVAABTAT
NWAACCACADNN----
 A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TAGCCCACAVAABTAT
NNNNGGTACCCCCCANN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TAGCCCACAVAABTAT
TATCGACCCCCCACAG----
 A C G T A C G T A C G T A C G T A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G A C G T A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TAGCCCACAVAABTAT
GACCCCCCACGAAG--
 A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TAGCCCACAVAABTAT
AAGCCCCCCAAAAAT--
 A C G T A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TAGCCCACAVAABTAT--
---NNNTAACAATTATAN
 A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TAGCCCACAVAABTAT
-AAACCACANN-----
 A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TAGCCCACAVAABTAT
-AAACCGCAAA-----
 A G C T C G T A A T C G A T G C G T A C A G T C G T C A G T A C C G T A T A G C C G T A C G T A A C T G A C G T C G T A A G C T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T