Information for 17-ACAAAGGATCTCT (Motif 37)

C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T
p-value:1e-3
log p-value:-8.151e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGGATCTCT
AACAAAGG------
 A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGGATCTCT
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGATCTCT
AAAACAAAGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGGATCTCT
RACAAWGG------
 A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACAAAGGATCTCT-
---AAGGATATNTN
 C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGGATCTCT
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACAAAGGATCTCT
ACAAAGGNBCCT-
 C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGGATCTCT
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGATCTCT
VRRACAAWGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGATCTCT
GGAACAAAGR------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A G T C A C G T A G T C A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T