Information for 14-CTRCAAATTTNGTTAG (Motif 24)

G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
Reverse Opposite:
G A T C A C G T T G C A C T G A A G T C A C G T C T G A T G C A C T G A A G C T A C G T C A G T A C T G A G C T C T G A C A T G
p-value:1e-4
log p-value:-9.543e+00
Information Content per bp:1.590
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif809.7
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets28.8 +/- 18.2bp
Average Position of motif in Background51.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F2/MA0683.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTRCAAATTTNGTTAG
ATGCATAATTAATGAG
 G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTRCAAATTTNGTTAG
----TAATTAAATTA-
 G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTRCAAATTTNGTTAG
----TAATTNVATTAN
 G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
A C G T A C G T A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTRCAAATTTNGTTAG
---YTAATYNRATTA-
 G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
A C G T A C G T A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTRCAAATTTNGTTAG
----TAATTAAATTA-
 G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTRCAAATTTNGTTAG
----TAATTAAATTA-
 G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
A C G T A C G T A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTRCAAATTTNGTTAG
ATTATGCTAATTT------
 A C G T A C G T A C G T G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTRCAAATTTNGTTAG
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTRCAAATTTNGTTAG
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTRCAAATTTNGTTAG
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T G A T C A G C T C T G A G T A C G C T A T G C A C T G A A G C T A C G T A G C T C G T A T A C G A G C T A C G T G T C A C A T G
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T