Information for 5-GMTTGATTTCTGT (Motif 13)

A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T
Reverse Opposite:
C G T A A T G C C G T A C A T G C T G A C G T A C G T A A C G T A T G C G T C A C G T A C A G T T A G C
p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.707
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif196.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets51.8 +/- 24.4bp
Average Position of motif in Background49.2 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GMTTGATTTCTGT
-ATTGATTYND--
 A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GMTTGATTTCTGT-
---TGATTTATGGC
 A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T A C G T
A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GMTTGATTTCTGT
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GMTTGATTTCTGT
-TTTGATTGATGN
 A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0126.1_Gata5_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GMTTGATTTCTGT---
NNNCTGATATCTCNNNN
 A C G T A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GMTTGATTTCTGT
---TGATTGATGA
 A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GMTTGATTTCTGT
NTTATTGATTTTTT-
 A C G T A C G T A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GMTTGATTTCTGT--
---TGATTTATGGCC
 A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GMTTGATTTCTGT
NNANTGATTGATNNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GMTTGATTTCTGT
NNANTGATTGATNTTN--
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G A T A C G T A T C G G T C A A C G T C G A T G A C T G A T C A C G T T A C G C G A T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T A C G T