Information for 7-GACAAATTAT (Motif 8)

A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
Reverse Opposite:
G T C A A C G T C G T A C G T A C G A T C G A T A C G T A C T G A C G T A G T C
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.884
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif39.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets42.6 +/- 27.1bp
Average Position of motif in Background54.3 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0107.1_Msx2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GACAAATTAT----
GAAGACCAATTAGCGCT
 A C G T A C G T A C G T A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

Dlx1/MA0879.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GACAAATTAT-
-CCTAATTATC
 A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GACAAATTAT--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

NOTO/MA0710.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GACAAATTAT-
-GCTAATTAGC
 A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

Nobox/MA0125.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GACAAATTAT
-ACCAATTA-
 A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T

VSX2/MA0726.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GACAAATTAT
--CTAATTAG
 A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

PAX4/MA0068.2/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GACAAATTAT
--CTAATTAG
 A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G

GBX1/MA0889.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GACAAATTAT-
-ACTAATTAGC
 A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

VSX1/MA0725.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GACAAATTAT
--CTAATTAT
 A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GACAAATTAT
--CTAATTAA
 A C T G G T C A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A