Information for 9-KGGMCAYTGC (Motif 6)

A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C
Reverse Opposite:
T A C G G T A C C G T A T C A G G A C T C T A G C A T G A G T C G T A C T G C A
p-value:1e-13
log p-value:-3.199e+01
Information Content per bp:1.452
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.11%
Number of Background Sequences with motif584.6
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets49.8 +/- 26.8bp
Average Position of motif in Background49.7 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-KGGMCAYTGC
CTGACCTTTG-
 A C G T A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-KGGMCAYTGC------
AATCGCACTGCATTCCG
 A C G T A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:KGGMCAYTGC----
TGACCTTTGCCCTA
 A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:KGGMCAYTGC-----
TGGACTTTGNNCTCN
 A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:KGGMCAYTGC------
TGGACTTTGNNCTNTG
 A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--KGGMCAYTGC--
TTTGCACACGGCAC
 A C G T A C G T A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--KGGMCAYTGC--
NGTTGCCATGGCAA
 A C G T A C G T A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-KGGMCAYTGC---
NTGCCCANNGGTNA
 A C G T A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:KGGMCAYTGC----
TGACCTTTGCCCCA
 A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-KGGMCAYTGC
ATGCCCACC--
 A C G T A C G T C A T G T C A G G T A C G A T C C T G A A G T C G C A T C A T G A T G C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T