Information for 9-GTGGCTCTGTGCA (Motif 14)

C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T G C C G T A A G T C C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.929
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 33.0bp
Average Position of motif in Background44.1 +/- 45.5bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGCTCTGTGCA-
TTGGCATGGTGCCA
 C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGCTCTGTGCA--
CTTGGCANNNTGCCAA
 A C G T C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGGCTCTGTGCA----
-GGGCCGTGTGCAAAAA
 C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTGGCTCTGTGCA-------
---TACATGTGCACATAAAA
 C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTGGCTCTGTGCA--
-TGGCAGNCTGCCAG
 C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GTGGCTCTGTGCA
-----GCTGTG--
 C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTGGCTCTGTGCA------
--NNGTATGTGCACATNNN
 C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCTCTGTGCA
NTTGGCANN-----
 A C G T C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCTCTGTGCA
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTGGCTCTGTGCA
---WDNCTGGGCA
 C T A G A C G T A C T G A C T G A G T C C G A T A G T C A C G T T C A G A C G T A T C G A G T C C G T A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A