Information for 10-AGAATTDAAW (Motif 16)

C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T
Reverse Opposite:
C G T A C A G T C G A T G T C A G C T A G C T A C G A T C G A T A T G C A G C T
p-value:1e-6
log p-value:-1.534e+01
Information Content per bp:1.586
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif136.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets50.9 +/- 25.5bp
Average Position of motif in Background51.2 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGAATTDAAW-
ATAAACAATTAAACA
 A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------AGAATTDAAW
NNTNANAACAATTNNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGAATTDAAW-
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AGAATTDAAW
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AGAATTDAAW
NNCNNAACAATTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AGAATTDAAW-
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AGAATTDAAW
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGAATTDAAW
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AGAATTDAAW-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AGAATTDAAW-
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C T A G C T A C G A T C G A T C A G T G C T A G T C A G C A T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C