Information for 9-TTTTATAAGG (Motif 14)

A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G
Reverse Opposite:
A G T C G A T C A C G T A G C T C T G A C G A T C G T A G C T A C T G A C G T A
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.838
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif63.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets38.7 +/- 27.2bp
Average Position of motif in Background52.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TTTTATAAGG
TTTTATKRGG
 A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTTTATAAGG
TTTTATTRGN
 A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATAAGG
NTTTTATTGG-
 A C G T A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATAAGG--
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTTTATAAGG---
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATAAGG--
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------TTTTATAAGG
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------TTTTATAAGG
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATAAGG
TTTTTATTGG-
 A C G T A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATAAGG
NTTTTACGAGN
 A C G T A C G T A G C T C A G T C G A T C G T A G A C T C T G A C G T A C A T G C T A G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C