Information for 10-AAATAATTATTTC (Motif 9)

C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
Reverse Opposite:
C A T G C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.905
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.4 +/- 24.1bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0019.1_Dbx2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---AAATAATTATTTC
TTTAATTAATTAATTC
 A C G T A C G T A C G T C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

PH0106.1_Msx1/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AAATAATTATTTC
TGCAACTAATTAATTC
 A C G T A C G T A C G T C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
A C G T T C A G G T A C G C T A C T G A G A T C G A C T G T C A C G T A C G A T C G A T C T G A C T G A A C G T G C A T G T A C

PH0028.1_En1/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AAATAATTATTTC
GCGAACTAATTAATGC
 A C G T A C G T A C G T C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

PH0008.1_Barx2/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---AAATAATTATTTC
NANAANTAATTANTTA
 A C G T A C G T A C G T C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
G A C T C T G A G A C T G T C A T C G A A G T C G A C T G T C A G C T A C A G T C A G T C T G A T G A C A G C T C G A T C G T A

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AAATAATTATTTC
AGTAATTAATTACTTC
 A C G T A C G T A C G T C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
T C G A T C A G G A C T G C T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A A G T C A C G T G A C T A G T C

Lhx3/MA0135.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AAATAATTATTTC
GATTAATTAATTT
 C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

PH0020.1_Dlx1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AAATAATTATTTC--
-ATTAATTANCTCAN
 C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C A C G T A C G T
A C G T T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G

PH0149.1_Pou3f4/Jaspar

Match Rank:8
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AAATAATTATTTC
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AAATAATTATTTC--
CNNAGTAATTAATTNNC
 A C G T A C G T C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C A C G T A C G T
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AAATAATTATTTC
-AATAATT-----
 C G T A C G T A C G T A A G C T C G T A C G T A A C G T A C G T C T G A C G A T A C G T A C G T G A T C
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T