Information for 5-ATCTTAACAG (Motif 4)

G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G
Reverse Opposite:
T G A C G C A T C A T G C A G T C G A T G C T A C T G A A C T G T C G A C G A T
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.663
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.88%
Number of Background Sequences with motif438.6
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets49.8 +/- 26.3bp
Average Position of motif in Background49.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTAACAG----
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTAACAG------
TCNCTTTACAGCGNNNT
 A C G T G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATCTTAACAG----
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTAACAG------
TCNNTTTACAGCGNNNT
 A C G T G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTAACAG------
TCNNTTTACAGCGNNNT
 A C G T G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATCTTAACAG-
---TTGACAGC
 G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATCTTAACAG-
ATATTTACATA
 G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATCTTAACAG---
---TTMACACCTT
 G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATCTTAACAG------
NTATTGACAGGTNNTN
 G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATCTTAACAG-
WWTRTAAACAVG
 A C G T G C T A A G C T T G A C G A C T C G A T G C T A G T C A G T A C C G T A A C T G A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G