Information for 8-ATGAAATTTC (Motif 13)

G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C
Reverse Opposite:
T C A G G T C A T G C A C G T A G C A T C G A T G C A T G A T C G T C A C G A T
p-value:1e-8
log p-value:-1.899e+01
Information Content per bp:1.647
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.99%
Number of Background Sequences with motif1779.3
Percentage of Background Sequences with motif3.71%
Average Position of motif in Targets53.0 +/- 26.4bp
Average Position of motif in Background50.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----ATGAAATTTC-
TTGAATGAAATTCGA
 A C G T A C G T A C G T A C G T G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGAAATTTC-
-GGGAATTTCC
 G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATGAAATTTC
NACAGGAAAT---
 A C G T A C G T A C G T G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATGAAATTTC
GKMTCADRTTWC
 A C G T A C G T G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGAAATTTC
ATTAAA----
 G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGAAATTTC
GKVTCADRTTWC
 A C G T A C G T G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGAAATTTC
AGATGCAATCCC
 A C G T A C G T G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATGAAATTTC-
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATGAAATTTC-
-GGGAATTTCC
 G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATGAAATTTC
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A G T C T A G C G T A G C T A C G T A G C A T A C G T C A G T A G T C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T