Information for 12-AAAACAGACTGTT (Motif 12)

T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T
Reverse Opposite:
T C G A T G C A G T A C C G T A A T C G C G A T A T G C C G A T C A T G G A C T G A C T C G A T A G C T
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.680
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif216.2
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets55.7 +/- 26.0bp
Average Position of motif in Background49.3 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAAACAGACTGTT-
AAGAACATWHTGTTC
 A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAACAGACTGTT-
VAGRACAKNCTGTBC
 A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAACAGACTGTT-
VAGRACAKWCTGTYC
 A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAACAGACTGTT--
NAGAACAGNCTGTNCT
 A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AAAACAGACTGTT
CAAAAGTAAACAAAG----
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAACAGACTGTT--
NAGNACANNNTGTNCT
 A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T A C G T A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAAACAGACTGTT
AAGTAAACAAA-----
 A C G T A C G T A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAAACAGACTGTT
GTAAACAG------
 A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAACAGACTGTT
CAAATCACTG----
 A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AAAACAGACTGTT
AACACCAAAACAAAGGA--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A C G T A G T A C C G T A T A C G G C T A T A G C C G A T A C T G A C G T A G C T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T