Information for 6-GTGCCGGGCAAACCCC (Motif 11)

A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 18.3bp
Average Position of motif in Background77.8 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTGCCGGGCAAACCCC
------GGAAATCCCC
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTGCCGGGCAAACCCC
----GGGGGAATCCCC
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTGCCGGGCAAACCCC-
----AGGGGATTCCCCT
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTGCCGGGCAAACCCC-
-----GGGAAATCCCCN
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTGCCGGGCAAACCCC-
----AGGGGATTCCCCT
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTGCCGGGCAAACCCC-
-----GGACACACCCCC
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GTGCCGGGCAAACCCC
------GGAAANCCCC
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GTGCCGGGCAAACCCC
------GGAAATTCCC
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTGCCGGGCAAACCCC
-TCCCAGMCRAGCCCC
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGCCGGGCAAACCCC
TTCGCGCGAAAA----
 A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A G T C
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T A C G T A C G T