Information for 4-ATCTCTGCAGGGTWCC (Motif 7)

G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
Reverse Opposite:
A C T G A C T G G C T A C G T A A T G C A G T C A G T C C G A T A C T G A G T C G T C A T A C G C G T A A C T G C T G A A C G T
p-value:1e-14
log p-value:-3.230e+01
Information Content per bp:1.793
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.5 +/- 16.0bp
Average Position of motif in Background72.6 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATCTCTGCAGGGTWCC
-DCHCAGCAGGRGGCC
 G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCTCTGCAGGGTWCC
-DCTCAGCAGG-----
 G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATCTCTGCAGGGTWCC
--CACAGCAGGGGG--
 G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCTCTGCAGGGTWCC
AAATCACTGC--------
 A C G T A C G T G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATCTCTGCAGGGTWCC
AAATCACAGCA-------
 A C G T A C G T G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATCTCTGCAGGGTWCC-
---TTGGCATGGTGCCA
 G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C A C G T
A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATCTCTGCAGGGTWCC
CCACACAGCAGGAGA--
 A C G T G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATCTCTGCAGGGTWCC---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATCTCTGCAGGGTWCC
CCACACAGCAGGAGA--
 A C G T G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATCTCTGCAGGGTWCC
GAGCACAGCAGGACA--
 A C G T G T C A A G C T A G T C A C G T A G T C A C G T A C T G A G T C C G T A C T A G A C T G A T C G A C G T C G A T G T A C G T A C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T