Information for 1-CGGGAGGAGSCGGGCC (Motif 3)

A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C
Reverse Opposite:
A T C G A T C G A G T C A G T C A G T C A C T G A T C G A G T C A G C T A T G C A G T C C G A T A T G C A G T C A G T C A T C G
p-value:1e-12
log p-value:-2.956e+01
Information Content per bp:1.840
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.7 +/- 21.0bp
Average Position of motif in Background39.4 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CGGGAGGAGSCGGGCC
-GGGNGGGGGCGGGGC
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGGGAGGAGSCGGGCC
--GGCGGGGGCGGGGG
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGGGAGGAGSCGGGCC-
NNNAAGGGGGCGGGNNN
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CGGGAGGAGSCGGGCC-
-----GGGGGCGGGGCC
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CGGGAGGAGSCGGGCC
-----GGGGGCGGGGC
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGGGAGGAGSCGGGCC--
----AGGGGGCGGGGCTG
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGGAGGAGSCGGGCC
-GGGAGGACNG-----
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGGAGGAGSCGGGCC
ANTGCGGGGGCGGN--
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGGGAGGAGSCGGGCC
----RGKGGGCGGAGC
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGGGAGGAGSCGGGCC
----RGKGGGCGKGGC
 A T G C T C A G A C T G A T C G C G T A A C T G A T C G T C G A A C T G A T G C A G T C A C T G A C T G A C T G A T G C A T G C
A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C