Information for 4-CAGAACCCHGGACAGC (Motif 9)

A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A C T G A G C T A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C G T A C T G
p-value:1e-13
log p-value:-3.138e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.3 +/- 23.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CAGAACCCHGGACAGC---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CAGAACCCHGGACAGC---
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGAACCCHGGACAGC
-----CCAGGAACAG-
 A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:CAGAACCCHGGACAGC
----------CACAGN
 A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAGAACCCHGGACAGC
NGNTCTAGAACCNGV------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CAGAACCCHGGACAGC
TATCATTAGAACGCT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CAGAACCCHGGACAGC
-----CAAAGGTCAG-
 A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CAGAACCCHGGACAGC
ATAAGAACAAAGGACTA-
 A C G T A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.47
Offset:-6
Orientation:reverse strand
Alignment:------CAGAACCCHGGACAGC
NNGATCTAGAACCTNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CAGAACCCHGGACAGC
AGAAGAACAAAGGACTA-
 A C G T A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G T C G T A C G A C T A C T G C T A G C T G A A G T C C G T A A C T G A T G C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T