Information for 8-ATCACAAAGGGAAACA (Motif 20)

C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T A G C T A C G T A G T C A G T C A G T C C A G T A G C T C G A T A C T G A C G T A C T G G T C A A C G T
p-value:1e-6
log p-value:-1.419e+01
Information Content per bp:1.905
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.1 +/- 25.2bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATCACAAAGGGAAACA
--AACAAAGG------
 C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCACAAAGGGAAACA
--RACAAWGG------
 C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATCACAAAGGGAAACA
AAAACAAAGG------
 C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATCACAAAGGGAAACA--
----CAAACGTAAACAAT
 C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATCACAAAGGGAAACA---
----CAAAAGTAAACAAAG
 C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATCACAAAGGGAAACA
VRRACAAWGG------
 C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATCACAAAGGGAAACA
---ACAAAG-------
 C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATCACAAAGGGAAACA
NNTNNACAATGGGANNN-
 A C G T A C G T C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCACAAAGGGAAACA
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCACAAAGGGAAACA
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A A G T C C G T A C T G A G T C A C T A G A C T G A C T G C G T A C T G A C G T A A T G C C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T