Information for 18-CCCTTCTGGAAAR (Motif 15)

A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G
Reverse Opposite:
A G T C A C G T A C G T A C G T T G A C G T A C C G T A T A C G T C G A G T C A C T A G A C T G A C T G
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.717
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif120.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets43.8 +/- 22.8bp
Average Position of motif in Background48.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCCTTCTGGAAAR
--CTTCTGGGAAA
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCTTCTGGAAAR-
---TTCTTGGAAAN
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G A C G T
A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCTTCTGGAAAR
CCTTTGTT-----
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTTCTGGAAAR
NNGCACCTTTCTCC----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCTTCTGGAAAR---
--TTTCCAGGAAATGG
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCTTCTGGAAAR
--TTTCCAGGAAA
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G
A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCTTCTGGAAAR-
NNCTTCCNGGAAGN
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCCTTCTGGAAAR-
--TTTCCNGGAAAN
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G A C G T
A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCCTTCTGGAAAR-
--TTTCTNAGAAAN
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G A C G T
A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCTTCTGGAAAR-
NATTTCCNGGAAAT
 A G T C A G T C A G T C A C G T A C G T A T G C C G A T A C T G A C T G T G C A G T C A C G T A C T A G A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T