Information for 14-TTCTBAGAATGAG (Motif 12)

A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
Reverse Opposite:
A G T C C G A T A G T C C G T A C G A T A C G T A G T C A C G T T A C G C T G A A C T G C G T A C G T A
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.849
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.9 +/- 29.5bp
Average Position of motif in Background39.0 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--TTCTBAGAATGAG
NTTTCTNAGAAA---
 A C G T A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTCTBAGAATGAG
ATTTCCAAGAA----
 A C G T A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTCTBAGAATGAG
NNNATTCCTCGAAAGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTCTBAGAATGAG
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCTBAGAATGAG
TTTCCCAGAAN---
 A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCTBAGAATGAG
TTTCCTGGAAA---
 A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTCTBAGAATGAG
NNNTTTCCTGGAAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTCTBAGAATGAG
NATTTCCNGGAAAT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCTBAGAATGAG-
TTTCCTGGAAAGNNN
 A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCTBAGAATGAG
TTTCCNGGAAAN--
 A C G T A C G T A C G T A G T C A G C T A T G C C G T A A C T G C G T A C G T A C G A T A C T G C G T A C T A G
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T