Information for 5-CCGCCVTTCCCAGAGT (Motif 11)

A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T
Reverse Opposite:
G C T A A G T C A C G T A T G C A G C T A C T G A T C G A C T G T C G A C G T A A G T C C A T G C T A G G A T C A C T G A T C G
p-value:1e-12
log p-value:-2.819e+01
Information Content per bp:1.705
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 17.1bp
Average Position of motif in Background62.4 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCGCCVTTCCCAGAGT
----HTTTCCCASG--
 A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCGCCVTTCCCAGAGT--
AACTACAATTCCCAGAATGC
 A C G T A C G T A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCGCCVTTCCCAGAGT
------TGCCCAGNHW
 A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGCCVTTCCCAGAGT
ACTACAATTCCC-----
 A C G T A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCGCCVTTCCCAGAGT---
----ATTTCCCAGVAKSCY
 A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGCCVTTCCCAGAGT--
RACTACAACTCCCAGVAKGC
 A C G T A C G T A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCGCCVTTCCCAGAGT
--GCCCCACCCA----
 A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T
A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCGCCVTTCCCAGAGT
--GCCACACCCA----
 A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCGCCVTTCCCAGAGT
--GCCCCGCCCC----
 A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T
A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGCCVTTCCCAGAGT
-GGCCACRCCCMK---
 A T G C T A G C C T A G A G T C G T A C T A C G G C A T A C G T A G T C A T G C A G T C C T G A A T C G T C G A T A C G C A G T
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T