Information for 8-CATCTCACCABAB (Motif 6)

G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
T C G A A C G T T A C G C G A T A C T G A C T G A C G T A T C G C G T A A C T G C G T A C A G T A C T G
p-value:1e-12
log p-value:-2.772e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 27.5bp
Average Position of motif in Background65.8 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CATCTCACCABAB
-ATCACCCCAT--
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CATCTCACCABAB--
---NWAACCACADNN
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CATCTCACCABAB
-ATCACCCCAT--
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CATCTCACCABAB-
----AAACCACAGC
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CATCTCACCABAB
---NAAACCACAG
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CATCTCACCABAB
---ATCACCCCAC
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATCTCACCABAB
CNGTCACGCCAC--
 A C G T G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATCTCACCABAB
NNACTTACCTN--
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATCTCACCABAB
ATTCTCGCGAGA-
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CATCTCACCABAB
--TCACACCT---
 G T A C G C T A A C G T A G T C A C G T A T G C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T