Information for 6-KCYGRGAGATSKGMCC (Motif 9)

A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A T G C G T C A A T G C C G T A A C G T A G T C A C G T A G T C A G T C G T A C C T A G A C T G G T A C
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 26.8bp
Average Position of motif in Background30.7 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---KCYGRGAGATSKGMCC
NNNACCGAGAGTNNN----
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-KCYGRGAGATSKGMCC
NGCTGCGATATCGNCGC
 A C G T A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KCYGRGAGATSKGMCC--
-CCNNACCATCTGGCCTN
 A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---KCYGRGAGATSKGMCC
GNNACCGAGAATNNN----
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:KCYGRGAGATSKGMCC--
----GGAGAAAGGTGCGA
 A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:KCYGRGAGATSKGMCC
---NNGAGATAAGA--
 A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C
A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----KCYGRGAGATSKGMCC
RGSMTBCTGGGAAAT------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.48
Offset:6
Orientation:forward strand
Alignment:KCYGRGAGATSKGMCC------
------GGGTGTGCCCAAAAGG
 A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.47
Offset:11
Orientation:reverse strand
Alignment:KCYGRGAGATSKGMCC-
-----------TGACCT
 A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:KCYGRGAGATSKGMCC----
NNNNNBAGATAWYATCTVHN
 A C T G A G T C A G T C A C T G C T A G C T A G C G T A A C T G G T C A A C G T A T C G A C G T A T C G G T A C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T