Information for 12-GAATCAGTCTGCA (Motif 29)

T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A
Reverse Opposite:
G A C T T A C G T G A C C G T A T C A G T C G A G A T C C A G T A T C G G T C A A C G T A G C T A G T C
p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.690
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif50.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets46.7 +/- 30.6bp
Average Position of motif in Background50.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GAATCAGTCTGCA
----CTGTCTGG-
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAATCAGTCTGCA
--VBSYGTCTGG-
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAATCAGTCTGCA
---TGAGTCAGCA
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAATCAGTCTGCA
----TWGTCTGV-
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAATCAGTCTGCA----
-GGGCCGTGTGCAAAAA
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAATCAGTCTGCA--
-GTGCCGTGTGCAAA
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A A C G T A C G T
A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAATCAGTCTGCA-----
-NCTANGTCAGCAAATTT
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAATCAGTCTGCA----
-----NGTCAGCANTTT
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAATCAGTCTGCA----
NNTNNTGTCTGGNNTNG
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GAATCAGTCTGCA----
------GTCAGCANNTN
 T A C G T C G A G T C A C A G T A T G C G T C A C A T G A G C T A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T