Information for 8-RCCCAGGCGCCCC (Motif 23)

T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
Reverse Opposite:
A C T G A C T G C T A G T C A G G A T C A T C G A T G C A G T C C G A T A C T G C T A G A C T G A G T C
p-value:1e-6
log p-value:-1.545e+01
Information Content per bp:1.715
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif231.9
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets46.9 +/- 22.4bp
Average Position of motif in Background53.8 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RCCCAGGCGCCCC
TGCCCAGNHW----
 A C G T T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---RCCCAGGCGCCCC
ATTTCCCAGVAKSCY-
 A C G T A C G T A C G T T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RCCCAGGCGCCCC
TCCCCTGGGGAC--
 A C G T T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--RCCCAGGCGCCCC
AGCAACAGCCGCACC
 A C G T A C G T T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RCCCAGGCGCCCC--
TCCCAGMCRAGCCCC
 T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---RCCCAGGCGCCCC
GGCACCCAGGGGTGC-
 A C G T A C G T A C G T T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RCCCAGGCGCCCC
CCCCCTTGGGCCCC
 A C G T T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RCCCAGGCGCCCC
-NNCAGGTGNN--
 T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:RCCCAGGCGCCCC
-NNCAGGTGCG--
 T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:RCCCAGGCGCCCC
--CCAGACRSVB-
 T C A G G T A C A G T C G T A C C G T A A C T G T A C G T A G C C T A G A G T C A G T C T G A C A G T C
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T