Information for 7-CKSVCWSCTGCCGCAG (Motif 13)

G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G
Reverse Opposite:
A G T C A C G T A C T G A G T C C T A G T A C G T A G C G T C A A C T G T A C G C G A T A T C G A G T C T A C G G T C A A C T G
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.628
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.90%
Number of Background Sequences with motif947.3
Percentage of Background Sequences with motif1.94%
Average Position of motif in Targets46.0 +/- 22.6bp
Average Position of motif in Background50.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:11
Orientation:reverse strand
Alignment:CKSVCWSCTGCCGCAG-
-----------CACAGN
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CKSVCWSCTGCCGCAG--
-------AAACCACAGAN
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CKSVCWSCTGCCGCAG
----CAACGTCCGCGG
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G
A C G T A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CKSVCWSCTGCCGCAG
----CCCCTCCCCCAC
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G
A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CKSVCWSCTGCCGCAG--
------NWAACCACADNN
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

POL002.1_INR/Jaspar

Match Rank:6
Score:0.52
Offset:12
Orientation:forward strand
Alignment:CKSVCWSCTGCCGCAG----
------------TCAGTCTT
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CKSVCWSCTGCCGCAG
---GCTCCGCCCMCY-
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CKSVCWSCTGCCGCAG
------NAAACCACAG
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CKSVCWSCTGCCGCAG------
--GCCTCCTCCMTCWGACTGKS
 G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CKSVCWSCTGCCGCAG
CTCAGCAGCTGCTACTG
 A C G T G T A C C A G T A T G C T C A G A T G C G C T A A T C G T G A C A C G T A T C G A T G C A G T C C T A G A G T C C G T A T C A G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G