Information for 5-CAAGTCCTGMAAS (Motif 11)

A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
Reverse Opposite:
A T G C A G C T A C G T A C T G A T G C T G C A A C T G T C A G C T G A A T G C G A C T A G C T A C T G
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.739
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif46.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets40.1 +/- 20.2bp
Average Position of motif in Background43.0 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAAGTCCTGMAAS
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAAGTCCTGMAAS
CACTTCCTGT---
 A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTCCTGMAAS
ACCACATCCTGT---
 A C G T A C G T A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------CAAGTCCTGMAAS
TNCNNAACAATTTTTNC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAAGTCCTGMAAS
ATGGAAAGTCGTAAAA-
 A C G T A C G T A C G T A C G T A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CAAGTCCTGMAAS
NTCAAGGTCA-----
 A C G T A C G T A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CAAGTCCTGMAAS-
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CAAGTCCTGMAAS
---RTTATGYAAB
 A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CAAGTCCTGMAAS
AAGGCAAGTGT------
 A C G T A C G T A C G T A C G T A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CAAGTCCTGMAAS
--NATTGTGCAAT
 A G T C C T G A C T G A A T C G A G C T A G T C G T A C A C G T A T C G T G A C G T C A C T G A T A C G
A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T