p-value: | 1e-12 |
log p-value: | -2.799e+01 |
Information Content per bp: | 1.884 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 1.06% |
Number of Background Sequences with motif | 0.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 44.2 +/- 30.2bp |
Average Position of motif in Background | 89.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACTTTAAAAAGTA CGGTTTCAAA---- |
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LIN54/MA0619.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ACTTTAAAAAGTA NATTCAAAT---- |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACTTTAAAAAGTA GNCTATAAAAGG-- |
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PB0192.1_Tcfap2e_2/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACTTTAAAAAGTA TACTGGAAAAAAAA |
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POL012.1_TATA-Box/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACTTTAAAAAGTA--- -GTATAAAAGGCGGGG |
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TBP/MA0108.2/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACTTTAAAAAGTA--- -GTATAAAAGGCGGGG |
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PB0182.1_Srf_2/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACTTTAAAAAGTA----- -GTTAAAAAAAAAAATTA |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ACTTTAAAAAGTA ATAACCACTTGAAAATT-- |
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PH0075.1_Hoxd10/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACTTTAAAAAGTA- AATGCAATAAAATTTAT |
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Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACTTTAAAAAGTA- -GGTTAAACATTAA |
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