Information for 8-CTTGCCCCGA (Motif 19)

G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A
Reverse Opposite:
G A C T A T G C A T C G A T C G C T A G T A C G T A G C C T G A C T G A C A T G
p-value:1e-5
log p-value:-1.359e+01
Information Content per bp:1.672
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif8.28%
Number of Background Sequences with motif1718.7
Percentage of Background Sequences with motif3.54%
Average Position of motif in Targets55.6 +/- 26.1bp
Average Position of motif in Background49.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTTGCCCCGA
-CTGCCCGCA
 G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTGCCCCGA--
--TGCCCAGNHW
 G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCCCCGA
NNACTTGCCTT--
 A C G T A C G T A C G T G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTGCCCCGA----
NNCNTGACCCCGCTCT
 A C G T A C G T G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTGCCCCGA----
NNNNTGACCCGGCGCG
 A C G T A C G T G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTTGCCCCGA
TGACCTTGACCT--
 A C G T A C G T A C G T A C G T G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTTGCCCCGA
-ATGCCCACC
 G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTGCCCCGA---
ACATGCCCGGGCAT
 A C G T G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTTGCCCCGA--
-TTTCCTGGAAA
 G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A A C G T A C G T
A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTTGCCCCGA-
-TTCCCCCTAC
 G T A C A G C T G A C T A T C G A T G C G A T C T A G C T A G C T A C G C T G A A C G T
A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C