Information for 4-CGCGGTGTCA (Motif 11)

G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A
Reverse Opposite:
C A G T C T A G T C G A G T A C G T C A T G A C G T A C A C T G A G T C A C T G
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.712
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif200.6
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets39.5 +/- 27.1bp
Average Position of motif in Background49.5 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGTGTCA-----
TNNNNGGTGTCATNTNT
 A C G T A C G T G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGCGGTGTCA
--AGGTGTCA
 G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGCGGTGTCA--
--TGGTTTCAGT
 G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CGCGGTGTCA-
----NTGTCAN
 G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGCGGTGTCA
--AGGTGTGA
 G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCGGTGTCA
--AGGTGTGA
 G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGCGGTGTCA--
--AGGTGTGAAM
 G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGCGGTGTCA----
GCGGAGGTGTCGCCTC
 A C G T A C G T G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGCGGTGTCA-----
CTCCAGGGGTCAATTGA
 A C G T A C G T G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGCGGTGTCA-
---CCTGTCAA
 G T A C T C A G T G A C C A T G A C T G A C G T A C T G A G C T A G T C G T C A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A