Information for 9-ATCTAWYGTRCMA (Motif 10)

C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C C G T A A G T C C T G A C G T A A C G T C G T A A C T G C G T A C G A T
p-value:1e-11
log p-value:-2.593e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 23.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATCTAWYGTRCMA---
AATCAATTGTTCCGCTA
 A C G T C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATCTAWYGTRCMA--
ANNTCTATTGTTCNNNA
 A C G T A C G T C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0074.1_Sox8_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCTAWYGTRCMA--
GTATCTATTGTTCTTTA
 A C G T A C G T C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATCTAWYGTRCMA--
NNTTTATTGTTCTNNN
 A C G T C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATCTAWYGTRCMA---
CNNNTATTGTTCNNNNN
 A C G T C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATCTAWYGTRCMA
--CCATTGTTC--
 C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A
A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATCTAWYGTRCMA-
NNNCCATTGTGTNAN
 A C G T C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATCTAWYGTRCMA-
---NATTGTGCAAT
 C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ATCTAWYGTRCMA----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATCTAWYGTRCMA-
----ATTGCGCAAC
 C G T A A C G T A G T C A C G T G T C A C G A T A G C T A C T G A C G T C T A G A G T C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C