Information for 25-TMTTGTSTMT (Motif 40)

A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T
Reverse Opposite:
C G T A A C T G C T G A A T C G G C T A G T A C T C G A G C T A C A G T T G C A
p-value:1e-3
log p-value:-8.606e+00
Information Content per bp:1.654
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif366.3
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets42.4 +/- 29.1bp
Average Position of motif in Background51.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TMTTGTSTMT-
TATTGTTTATT
 A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TMTTGTSTMT-
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

FOXG1/MA0613.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TMTTGTSTMT
--TTGTTTAC
 A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T
A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TMTTGTSTMT-----
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TMTTGTSTMT
--TTGTTTAC
 A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T
A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TMTTGTSTMT
-ATTGTTTAN
 A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TMTTGTSTMT----
--NTGTTTAYATWW
 A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TMTTGTSTMT
CTCATTGTC---
 A C G T A C G T A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TMTTGTSTMT---
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TMTTGTSTMT
TCTTATCT--
 A C G T G T C A C G A T A G C T C A T G C G A T T A G C G A C T T G A C G C A T
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T