Information for 1-GCGCTAAGCG (Motif 6)

A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G
Reverse Opposite:
G A T C A T C G A G T C A G C T C G A T G C T A A C T G T G A C A C T G A T G C
p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.846
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif30.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets55.4 +/- 26.7bp
Average Position of motif in Background54.9 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GCGCTAAGCG-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GCGCTAAGCG-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCGCTAAGCG-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCGCTAAGCG-
---CTAATKGV
 A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G A C G T
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCGCTAAGCG--
--GCTAAACGGT
 A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G A C G T A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGCTAAGCG--
--GCTAATTGCT
 A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G A C G T A C G T
A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCGCTAAGCG--
---TTAAGTGGN
 A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGCTAAGCG
RGGGCACTAACY-
 A C G T A C G T A C G T A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCGCTAAGCG--
---CTAATCGNT
 A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G A C G T A C G T
A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCGCTAAGCG
--GCTAATCC
 A T C G A G T C A C T G A G T C C G A T G C T A C T G A A C T G A T G C C T A G
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C