Information for 5-TTAACAGGTT (Motif 13)

A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T
Reverse Opposite:
C G T A C G T A T A G C A G T C A G C T A C T G A G C T A G C T T G C A C G T A
p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.857
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.3 +/- 25.3bp
Average Position of motif in Background45.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTAACAGGTT
TTMACACCTT
 A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTAACAGGTT--
NAAACCGGTTTT
 A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T A C G T A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTAACAGGTT---
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTAACAGGTT-
-AAACCGGTTT
 A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T A C G T
A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTAACAGGTT---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTAACAGGTT---
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTAACAGGTT---
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTAACAGGTT-
--AACAGGTGT
 A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T A C G T
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTAACAGGTT
TTGACAGC--
 A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------TTAACAGGTT-
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A G T C C T G A A C T G A T C G C G A T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G