Information for 4-CCAGAGACDATCA (Motif 10)

A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A
Reverse Opposite:
A C G T A C T G C T G A A C G T G C T A A C T G A C G T A G T C A C G T G T A C A C G T A C T G C T A G
p-value:1e-10
log p-value:-2.339e+01
Information Content per bp:1.867
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.5 +/- 23.4bp
Average Position of motif in Background50.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAGACDATCA
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAGACDATCA
ATGCCAGACN------
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAGACDATCA------
NDBAGATRWTATCTVNNNNN
 A C G T A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCAGAGACDATCA
CCAGACRSVB---
 A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCAGAGACDATCA
CCAGACAG-----
 A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCAGAGACDATCA-
-----GACAATGNN
 A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCAGAGACDATCA--
-AAGATAAGATAACA
 A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCAGAGACDATCA--
----AGCCACTCAAG
 A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CCAGAGACDATCA-
------CCAATCAA
 A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------CCAGAGACDATCA
NNNNTGCCAGTGATTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C T G C G T A A G T C C G A T G T C A A G C T G T A C G T C A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T