Information for 4-CGCTGGCGGCGCG (Motif 6)

A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G
Reverse Opposite:
G T A C T C A G A G T C A C T G A G T C A G T C C T A G G T A C A G T C C G T A T C A G A G T C A C T G
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.879
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif45.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets56.9 +/- 26.8bp
Average Position of motif in Background62.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGGCGGCGCG--
NAGANTGGCGGGGNGNA
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CGCTGGCGGCGCG--
-------GGCGCGCT
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGGCGGCGCG--
NNNNTTGGCGCCGANNN
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCTGGCGGCGCG
RGKGGGCGGAGC-
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGCTGGCGGCGCG
CAAGATGGCGGC---
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGGCGGCGCG
GGCGGGGGCGGGGG-
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGGCGGCGCG--
NNNNTTGGCGCCGANNN
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGCTGGCGGCGCG--
----GGGGGCGTGGC
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCTGGCGGCGCG
-GGGGGCGGGGCC
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGCTGGCGGCGCG
ANTGCGGGGGCGGN---
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G G T A C C T A G A G T C A C T G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T