Information for 20-CGGCAGAGTGGAG (Motif 24)

A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A C T G
p-value:1e-4
log p-value:-1.133e+01
Information Content per bp:1.928
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 20.7bp
Average Position of motif in Background49.7 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CGGCAGAGTGGAG
-------GTGGAT
 A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CGGCAGAGTGGAG
TAGGGCAAAGGTCA-
 A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:3
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CGGCAGAGTGGAG
CCGGAAGTGGC---
 A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CGGCAGAGTGGAG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

ETV6/MA0645.1/Jaspar

Match Rank:5
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CGGCAGAGTGGAG
AGCGGAAGTG-----
 A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGAGTGGAG
RCCGGAAGTD-----
 A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CGGCAGAGTGGAG
ANCCGGAAGT------
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGAGTGGAG
NCCGGAAGTGG----
 A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGAGTGGAG
TGGGGCAAAGGTCA-
 A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CGGCAGAGTGGAG
RGKGGGCGGAGC----
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G C T T A C G A C T G C G T A A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T