Information for 10-GCCCCAGCAACACCAC (Motif 23)

A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G C T A G A C G T A C T G A C G T A G C T A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G T C
p-value:1e-5
log p-value:-1.339e+01
Information Content per bp:1.922
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 24.6bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCCCAGCAACACCAC
-SCCTAGCAACAG---
 A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCCCCAGCAACACCAC---
---NNGGCGACACCTCNNN
 A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCAGCAACACCAC
GGCTCYAKCAYC-----
 A C G T A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCAGCAACACCAC--
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCCCCAGCAACACCAC
TGTTKCCTAGCAACM----
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCCCCAGCAACACCAC------
--CCCCAAACCACCCCCCCCCA
 A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGCAACACCAC
TACCATAGCAACGGT--
 A C G T A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCCCCAGCAACACCAC
GTTGCCATGGCAAC-----
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCCCAGCAACACCAC--
---CAAACAACAACACCT
 A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GCCCCAGCAACACCAC
ATCCCCGCCCCTAAAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C C G T A A T C G G T A C C T G A G T C A A G T C C G T A A G T C A G T C G T C A A G T C
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T